Diferencia entre revisiones de «Usuario:Alexsavio»
De Grupo de Inteligencia Computacional (GIC)
Línea 216: | Línea 216: | ||
== Utilidades == | == Utilidades == | ||
* [[como-instalar-vpn-en-ubuntu | | * [[alexsavio_scripts | My scripts]] | ||
* [[Wiki Weka]] | |||
* [[como-instalar-vpn-en-ubuntu | Install Cisco VPN client on Ubuntu 8.04]] | |||
* [[Nomenclatura_planos_de_corte | Nomenclatura de los planos de corte en los seres vivos]] | * [[Nomenclatura_planos_de_corte | Nomenclatura de los planos de corte en los seres vivos]] | ||
Línea 232: | Línea 236: | ||
* [http://www.imagemagick.org/Usage ImageMagick Usage Examples] | * [http://www.imagemagick.org/Usage ImageMagick Usage Examples] | ||
* [[Wiki | * [http://impressive.sourceforge.net Impressive - The stylish way of giving PDF presentations] | ||
* [http://www.itk.org/Wiki/ITK_Configuring_and_Building Install ITK from sources.] | |||
* [http://www.itk.org/Wiki/ITK_Python_Wrapping Install python wrapper on building ITK from sources.] | |||
* [http://www.slicer.org/slicerWiki/index.php/Slicer3:Execution_Model_Documentation#Types_of_Slicer_3_Plugins Create a 3DSlicer Plugin] | |||
* [http://davyd.livejournal.com/230629.html Sync Tomboy Notes] | |||
* [[Pushing_references_from_JabRef_To_Lyx | Push references from JabRef to Lyx]] | |||
* [http://apsy.gse.uni-magdeburg.de/main/index.psp?sec=1&page=hanke/fsl&lang=en Página de instalación de FSL en Debian] | |||
* [http://www.fmrib.ox.ac.uk/fsl/fslvbm/index.html FSL VBM How to] | |||
* [http:// | * [http://www.nitrc.org/projects/multimodereg BRAINSFit - Rigid Registration Tool] | ||
* [[Statistical Parametric Mapping]] | * [[Statistical Parametric Mapping]] | ||
Línea 242: | Línea 260: | ||
* [http://www.sph.umich.edu/~nichols/JohnsGems5.html SPM5-Specific code snippets by John Ashburner] | * [http://www.sph.umich.edu/~nichols/JohnsGems5.html SPM5-Specific code snippets by John Ashburner] | ||
* [[ | * [http://www.ogre3d.org/wiki/index.php/Quaternion_and_Rotation_Primer#Quaternion_Rotations A Quaternion and Rotation Primer] | ||
* [http://www.fmrib.ox.ac.uk/fsl/fdt/index.html FMRIB's Diffusion Toolbox - FDT v2.0] | |||
* [http://www.na-mic.org/Wiki/index.php/Slicer3.2:Training 3D Slicer User Documentation] | |||
* [[Setting up FSL to use a SunGridEngine or computing cluster]] | |||
* [http://www.sph.sc.edu/comd/rorden/workshop/fsl/dti/index.html Short introduction to DTI analysis] | |||
* [http://www.csie.ntu.edu.tw/~cjlin/libsvm/ LIBSVM - A library for Support Vector Machines] | |||
<br/> | <br/> |
Revisión del 19:55 21 ene 2009
Alexandre Manhães Savio
- Contact: alexandre.manhaes__at__ehu.es
Studies
- Engineer in Computer Science (October 2006) - University of the Basque Country
- PhD Student in the Computational Intelligence Group of the Computer Science and Artificial Intelligence department - University of the Basque Country
Courses
- 7th-11th July, 2008 - AERFAI Summer School - PRMA'08 - Pattern Recognition for Motion Analysis in the Computer Vision Center of the Universidad Autónoma de Barcelona.
Publications
2008
Maite García-Sebastián, A. M. Savio, M. Graña. Comments on an Evolutionary Intensity Inhomogeneity Correction Algorithm Proceedings CEC 2008, pp.4147-4151 ISBN 978-1-4244-1823-7
Research Areas
- MRI medical images segmentation and registration for brain functional localization
- Gesture recognition systems
Research Questions
- Mutual information non linear registration procedure.
- Steps of cortical surface registration. Cortical topology reconstruction.
- Tensor Based Morphometry
- ¿Where is the water and the preys in this jungle?
Pending Tasks
- Preparar informe sobre VBM
- Preparar capítulo de libro sobre registro no lineal.
- Learn 3DSlicer and FSL for registration.
- Learning how to use ITK, VTKEdge and ParaView.
- Creating plugin for 3DSlicer for groupwise registration method.
Deadlines de congresos y trabajos pendientes
"I love deadlines. I especially like the whooshing sound they make as they go flying by." - Douglas Adams
Due Dates for Abstract Submission: 28 July 2008. Submit Your Manuscript: 12 January 2009.
Regular Paper Submission: October 17, 2008
Still coming...
Submission of papers: 23rd January 2009. Should not exceed 8 pages in the LNCS Springer-Verlag format.
Submission of full papers: 8 March 2009. Papers for MICCAI 2009 must be submitted in LNCS style, prepared for double-blind review, and may be up to 8 pages, including all references, tables and figures.
Proyectos
- Petición Proyecto MICINN 2008
- Fin de SAIOTEK 2007
Work diary (meetings with directors)
2008
- 29/05 - Presentation of Jean-Luc and Charlotte about the OASIS presentation paper.
- 30/05 (15:00 - 17:00) - Discusión de artículo de Ardenakia
Current readings
Books
- Human Brain Function 2nd edition - J Ashburner, K Friston and W Penny PDF completo
- Medical Image Registration - by Joseph V. Hajnal (Editor), Derek L.G. Hill (Editor), David J. Hawkes (Editor)
Working articles
- Point similarity measures for non-rigid registration of multi-modal data - Peter Rogelj, Stanislav Kovacic, James C. Gee, Computer Vision and Image UnderstandingVolume 92, Issue 1, , October 2003, Pages 112-140.
- Quantitative comparison of algorithms next term for previous terminter-subject registration of 3D volumetric brain MRI scans - Babak A. Ardekania, Stephen Guckemusa, Alvin Bachmana, Matthew J. Hoptmanb, Michelle Wojtaszeka and Jay Nierenberga
- Nonrigid registration of brain MRI using NURBS - Jianzhe Wang and Tianzi Jian
- Contour Fitting Using an Adaptive Spline Model (1995) - Daniel Rueckert, Peter Burger
- More reading information in my groupware article Artículos Image Registration
Congresos y revistas objetivo
Revistas (ordenadas por factor de impacto)
1- Journal of Magnetic Resonance Imaging
3- IEEE Transactions of Medical Imaging
4- Magnetic Resonance in Medicine
Otras revistas
Congresos
Direcciones web de interés
Databases
Research Groups
- Structural Brain Mapping Group - University of Jena - Thüringen - central Germany
- Section of Biomedical Image Analysis - University of Pennsylvania
Utilidades
Mis curiosidades sobre el mundo real
- Presentación de Luis Ibañez sobre el sin sentido del entorno de "ciencia abierta" en la que trabajamos. ( Página personal de Luis Ibañez en Kitware )
Estado burocrático de la tesis
- Director
- Manuel Graña
- primer año de cursos de doctorado
- matriculado para el trabajo de investigación