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Revisión del 12:04 6 jul 2009

Alexandre Manhães Savio

Contact: alexandre.manhaes__at__ehu.es

Studies

Engineer in Computer Science (October 2006) - University of the Basque Country

Currently: PhD Student in the Computational Intelligence Group of the Computer Science and Artificial Intelligence department - University of the Basque Country

Work Experience

April/2007 - January/2007 - Software Engineer in InnovaeVision, San Sebastián, Guipúzcoa, Spain.

Gained experience on: Java, Spring Framework, Hibernate, C/C++, GTK+, Cairo graphics, DirectFB

July/2004 - April/2007 - Software Engineer in JADE Systems S.L., Zizur Mayor, Navarra, Spain.

Gained experience on: C/C++, C++ Borland Builder 6, GUI design, Programming language parser (ANTLR), GNU/Linux Systems administration

Courses

7th-11th July, 2008 - AERFAI Summer School - PRMA'08 - Pattern Recognition for Motion Analysis in the Computer Vision Center of the Universidad Autónoma de Barcelona.

1st-12th July, 2009 - Athinoula A. Martinos Center for Biomedical Imaging, Boston, MA - Two-Week Multi-Modality Short Course

Publications

Archivo:Alexsavio references.bib.zip BibTex File

2009

Maite García-Sebastián, Alexandre Savio, Manuel Graña, Jorge Villanúa: On the use of Morphometry based features for Alzheimer's Disease detection on MRI; Bio-Inspired Systems: Computational and Ambient Intelligence. / IWANN 2009 (Part I); Joan Cabestany, Francisco Sandoval, Alberto Prieto, Juan M. Corchado (Editors), LNCS 5517, Springer Verlag 2009, pp. 957-964; ISBN 978-3-642-02477-1; Data:; List of 98 OASIS females

Alexandre Savio, Maite García-Sebastián, Manuel Graña, Jorge Villanúa: Results of an Adaboost approach on Alzheimer's Disease detection on MRI; Methods and Models in Artificial and Natural Computation. / IWINAC 2009 (Part II); José Mira, José Manuel Ferrández, José R. Álvarez, Félix de la Paz, F. Javier Toledo (Editors), LNCS 5602, Springer Verlag 2009, pp. 114-123; Data:; List of 98 OASIS females

Alexandre Savio, Maite García-Sebastián, Carmen Hernández, Manuel Graña, Jorge Villanúa: Classification Results of Artificial Neural Networks for Alzheimer's Disease Detection; Accepted for the IDEAL 2009; ISBN pending; Data:; List of 98 OASIS females

2008

Maite García-Sebastián, A. M. Savio, M. Graña.: Comments on an Evolutionary Intensity Inhomogeneity Correction Algorithm [1]; Proceedings CEC 2008, pp.4146-4150; ISBN 978-1-4244-1822-0

Alexandre Manhaes Savio: Brain Image Registration - Capítulo de libro en las Actas de las II Jornadas de Inteligencia Computacional - JIC'08; Ramón Moreno Jiménez, Alexandre Manhaes Savio (Editors); Servicio editorial de la UPV/EHU.; ISBN 978-84-296-2316-1

Projects

SAIOTEK 2008

Desarrollo de métodos y técnicas de análisis de imagen de resonancia magnética cerebral en el ámbito del software libre para estudio de enfermedades neurodegenerativas (BRAINER) [2]
Investigadora principal: Carmen Hernandez Gomez
Entidades: Ciencias de la Computación e Inteligencia Artificial (UPV/EHU), Fundación Vasca de Innovación e Investigación Sanitaria/B+I+O (Eusko Fundazioa), Departamento de Neurociencia (UPV/EHU)
Año Solicitud: 2.008 Fecha entrada: 19/02/09

Programa "Red guipuzcoana de Ciencia, Tecnología e Innovación" Gipuzkoako Foru Aldundia/Diputación Foral de Guipúzcoa

Detección preclínica del Alzheimer mediante Neuroimagen [3]
Referencia: OF145/2007
Investigadora principal: Maite García-Sebastián
Organismo: Universidad del País Vasco
Duración: 1 año

SAIOTEK 2007

Desarrollo de técnicas de análisis de imágenes de Resonancia Magnética con aplicación en el diagnóstico preclínico de la enfermedad de Alzheimer [4], [5]
Referencia: S-PR07UN02
Investigadora principal: Maite García-Sebastián
Entidades participantes: UPV/EHU-Departamento de CCIA, Osatek-Gipuzkoa.
Duración: 2 años

Otros proyectos del grupo [6]

Research Areas

Pattern recognition applied to medical images
Brain medical images processing
Gesture recognition systems

Research Questions

Mutual information non linear registration procedures.

Steps of cortical surface registration. Cortical topology reconstruction.

Tensor Based Morphometry

Pending Tasks

Learn ITK, ANTS...
Feed mind

Deadlines de congresos y trabajos pendientes

"I love deadlines. I especially like the whooshing sound they make as they go flying by." - Douglas Adams

BIOSTEC 2009

Regular Paper Submission: October 17, 2008

SPIE Medical Imaging

Due Dates for Abstract Submission: 28 July 2008. Submit Your Manuscript: 12 January 2009.

Annual Meeting of the Organization for Human Brain Mapping

Deadline: January 14, 2009

IWANN 2009

Submission of papers: 23rd January 2009. - Changed to 30th January. Should not exceed 8 pages in the LNCS Springer-Verlag format.

IWINAC 09

Final Date for Submission: February 15, 2009

MICCAI 2009

Submission of full papers: 08/03/2009. Papers for MICCAI 2009 must be submitted in LNCS style, prepared for double-blind review, and may be up to 8 pages, including all references, tables and figures.

CAIP 2009

Submission of full papers: 31/03/2009 Springer

Neuroscience 2009

Submission: (April 23 - Abstract submission opens) - (May 14 - Abstract submission deadline) Journal of Neuroscience

WHOOOOSH!!!

Still coming...

IDEAL 2009

Deadline for papers submission: 5th May, 2009

NSS/MIC 2009

Submission of full papers: 11/05/2009 IEEE

ICPR 2010

Submission of full papers: Jan 15, 2010

Proyectos

SAIOTEK 2008

Work diary (meetings with directors)

Current readings

Books

Human Brain Function 2nd edition - J Ashburner, K Friston and W Penny PDF completo

Medical Image Registration - by Joseph V. Hajnal (Editor), Derek L.G. Hill (Editor), David J. Hawkes (Editor)

Splines - A perfect Fit for Signal and Image Processing

Insight Into Images

Numerical Methods for Image Registration - [7]

  @book{mcconnell_applications_1960,
        title = {Applications of Tensor Analysis},
        isbn = {0486603733},
        publisher = {Dover Publications},
        author = {A. J. {McConnell}},
        month = jun,
        year = {1960}
       }

Working articles

Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration - Arno Klein, Jesper Andersson, Babak A. Ardekani, John Ashburner, Brian Avants, Ming-Chang Chiang, Gary E. Christensen, Louis D. Collins, James Gee, Pierre Hellier, Joo Hyun Song, Mark Jenkinson, Claude Lepage, Daniel Rueckert, Paul Thompson, Tom Vercauteren, Roger P. Woods, J. John Mann, Ramin V. Parsey. NeuroImage (2009) DOI

Symmetric diffeomorphic image registration with cross-correlation: Evaluating automated labeling of elderly and neurodegenerative brain - B.B. Avants, C.L. Epstein, M. Grossman and J.C. Gee. - Medical Image Analysis Volume 12, Issue 1, February 2008, Pages 26-41 - Special Issue on The Third International Workshop on Biomedical Image Registration – WBIR 2006

A variational approach to multi-modal image matching - Hermosillo Gerardo; Chef d'Hotel Christophe; Faugeras Olivier - Variational and Level Set Methods in Computer Vision, 2001. Proceedings. IEEE Workshop on

Point similarity measures for non-rigid registration of multi-modal data - Peter Rogelj, Stanislav Kovacic, James C. Gee, Computer Vision and Image UnderstandingVolume 92, Issue 1, , October 2003, Pages 112-140.