Category Archives: MM/MD @en

LAMMPS

LAMMPS (“Large-scale Atomic/Molecular Massively Parallel Simulator”) is a molecular dynamics program from Sandia National Laboratories. LAMMPS makes use of MPI for parallel communication and is a free open-source code, distributed under the terms of the GNU General Public License. LAMMPS … Continue reading

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GROMACS

General information 2018 version. GROMACS is a versatile package to perform molecular dynamics, i.e. simulate the Newtonian equations of motion for systems with hundreds to millions of particles. It is primarily designed for biochemical molecules like proteins, lipids and nucleic … Continue reading

Posted in Biochemistry, MM/MD @en, Scientific Software | Leave a comment