Edukia

Ecophysiological roles of abaxial anthocyanins in a perennial understory herb from temperate deciduous forests

Egileak:
Fernández-Marín B, Esteban R, Míguez F, Artetxe U, Castañeda V, Pintó-Marijuan M, Becerril JM, García-Plazaola JI
Urtea:
2015
Aldizkaria:
AoB Plants
Liburukia:
7:plv042
Deskribapena:

Abstract

Accumulation of abaxial anthocyanins is an intriguing leaf trait particularly common among deeply-shaded understorey plants of tropical and temperate forests whose ecological significance is still not properly understood. To shed light on it, possible ecophysiological roles of abaxial anthocyanins were tested in the perennial understorey herb of temperate deciduous forests Saxifraga hirsuta, chosen as model species due to the co-existence of green and anthocyanic leaves and the presence of an easily removable lower anthocyanic epidermis. Anthocyanins accumulated during autumn, which temporally matched with overstorey leaf fall. Patterns of development of abaxial anthocyanins and direct measurements of photochemical efficiency under monochromatic lights were not consistent with a photoprotective hypothesis. Enhancement of light capture seemed also unlikely since the backscattering of red light towards the lower mesophyll was negligible. Seed germination was similar under acyanic and anthocyanic leaves. A relevant consequence of abaxial anthocyanins was the dramatic reduction of light transmission through the leaf. Dark environment generated underneath the Saxifraga canopy was enhanced by the horizontal repositioning of leaves, which occurs in parallel to reddening. This might play a role in the biotic interactions by inhibiting vital processes of competitors, which maybe of especial importance in spring before the overstorey leaves sprout.

Informazio gehigarria

Leaf functional plasticity decreases the water consumption without further consequences for carbon uptake in Quercus coccifera L. under Mediterranean conditions

Egileak:
Peguero-Pina JJ, Sisó S, Fernández-Marín B, Flexas J, Galmés J, García-Plazaola JI, Niinemets Ü, Sancho-Knapik D, Gil-Pelegrin E
Urtea:
2015
Aldizkaria:
Tree Physiology
Liburukia:
accepted

Application of ecological risk assessment based on a novel TRIAD-tiered approach to contaminated soil surrounding a closed non-sealed landfill

Egileak:
Gutierrez, L; Garbisu, C; Ciprian, E; Becerril, JM; Soto, M; Etxebarria, J; Madariaga, JM; Antiguedad, I; Epelde, L
Urtea:
2015
Aldizkaria:
Science of the Total Environment
Liburukia:
514
Hasierako orria - Amaierako orria:
49 - 59
Deskribapena:

Abstract

The Ecological Risk Assessment (ERA) is a reliable tool for communicating risk to decision makers in a comprehensive and scientific evidence-based way. In this work, a site-specific ERA methodology based on the TRIAD approach was applied to contaminated soil surrounding a closed non-sealed landfill, as a case study to implement and validate such ERA methodology in the Basque Country (northern Spain). Initially, the procedure consisted of the application of a Parameter Selection Module aimed at selecting the most suitable parameters for the specific characteristics of the landfill contaminated soil, taking into consideration the envisioned land use, intended ecosystem services and nature of contaminants. Afterwards, the selected parameters were determined in soil samples collected from two sampling points located downstream of the abovementioned landfill. The results from these tests were normalized to make them comparable and integrable in a risk index. Then, risk assessment criteria were developed and applied to the two landfill contaminated soil samples. Although the lack of a proper control soil was evidenced, a natural land use was approved by the ERA (at Tier 2) for the two landfill contaminated soils. However, the existence of a potential future risk resulting from a hypothetical soil acidification must be considered.

Informazio gehigarria

Early gene expression in Pseudomonas fluorescens exposed to a polymetallic solution

Egileak:
Gomez-Sagasti, MT; Becerril, JM; Epelde, L; Alkorta, I; Garbisu, C
Urtea:
2015
Aldizkaria:
Cell Biology and Toxicology
Liburukia:
31
Hasierako orria - Amaierako orria:
39 - 81
Deskribapena:

Abstract

The molecular response of Pseudomonas fluorescens cells exposed to a mixture of heavy metals remains largely unknown. Here, we studied the temporal changes in the early gene expression of P. fluorescens cells exposed to three doses of a polymetallic solution over two exposure times, through the application of a customized cDNA microarray. At the lowest metal dose (MD/4), we observed a repression of the Hsp70 chaperone system, MATE and MFS transporters, TonB membrane transporter and histidine kinases, together with an overexpression of metal transport (ChaC, CopC), chemotaxis and glutamine synthetase genes. At the intermediate metal dose (MD), several amino acid transporters, a response regulator (CheY), a TonB-dependent receptor and the mutT DNA repair gene were repressed; by contrast, an overexpression of genes associated with the antioxidative stress system and the transport of chelates and sulfur was observed. Finally, at the highest metal dose (4MD), a repression of genes encoding metal ion transporters, drug resistance and alginate biosynthesis was found, together with an overexpression of genes encoding antioxidative proteins, membrane transporters, ribosomal proteins, chaperones and proteases. It was concluded that P. fluorescens cells showed, over exposure time, a highly complex molecular response when exposed to a polymetallic solution, involving mechanisms related with chemotaxis, signal transmission, membrane transport, cellular redox state, and the regulation of transcription and ribosomal activity.

Informazio gehigarria

Physiological factors uncoupling the photochemical reflectance index (PRI) from the photosynthetic light use efficiency (LUE)

Egileak:
Porcar-Castell, A., Garcia-Plazaola JI, Nichol C., Kolari P, Olascoaga B., Esteban R., Nikinmaa E
Urtea:
2011
Komunikazioa kongresuan:
Annual Meeting: Finnish Centre of Excellence in Physics, Chemistry, Biology and Meteorology of Atmospheric Composition and Climate Change
Argitaratze hiria edo/eta Argitaletxea:
Luosto (Finlandia)

La investigación actual en ecofisiología vegetal: Arabidopsis frente a la biodiversidad vegetal (500 millones de años haciendo experimentos)

Egileak:
Flexas, J. García-PLazaola JI
Urtea:
2012
Txostena kongresuan:
II Coloquio de Ecofisiología Forestal
Argitaratze hiria edo/eta Argitaletxea:
Mallorca, Illes Balears

Patrones evolutivos de los compuestos fotoprotectores

Egileak:
Esteban, R., Olano JM., Castresana J., Fernández-Marín, B., Hernández, A., Becerril, JM., García-Plazaola, JI
Urtea:
2011
Komunikazioa kongresuan:
I Coloquio de primavera sobre Ecofisiología Vegetal
Argitaratze hiria edo/eta Argitaletxea:
Espejo, Álava

La vida nocturna del ciclo de la Violxantina

Egileak:
Fernández-Marín, B., Míguez, F., Esteban, R., Balaguer, L., Becerril, JM., García-Plazaola, JI
Urtea:
2011
Komunikazioa kongresuan:
I Coloquio de primavera sobre Ecofisiología Vegetal
Argitaratze hiria edo/eta Argitaletxea:
Espejo, Álava

SAMPLING FOR SOIL CHARACTERIZATION IN ARINEZ FOR THE PROJECT INTERREG PHYTOSUDOE

Lehenengo argitaratze data: 2016/11/22

Irudia

On date 11/10/2016 we initiated the physico-chemical characterization of the Ariñez site (Alava, Spain). To do that, we sampled the soil (topsoil) on the 18 plots where we will conduct the experiments on Phytomanagement of a contaminated site (S6). In the samples we analyzed basic agronomic parameters of soil and the presence of contaminants. This soil has been later amended (18/10/2016) with organic compost. On February, this site will be planted with willow and alfalfa.

AUTUMN ADVANCED SEMINARS IN ENVIRONMENTAL AGROBIOLOGY IN THE UNIVERSITY OF THE BASQUE COUNTRY (UPV/EHU) AND PUBLIC UNIVERSITY OF NAVARRE (UPNA),

Lehenengo argitaratze data: 2016/11/22

In the frame of the Postgraduate Program of Environmental Agrobiology we organized some Advanced Seminars for master students and doctorate student related with areas soil degradation/contamination, and soil restoration using a phytomagement technology approach. These areas are related with the objectives of the Interreg Phytosudoe Project. The objectives of the seminars are to disseminate recent results of the projects and stimulate the contact of senior and relevant researchers with post-doctorates, postgraduate students (doctorate and master students). The active participation of postgraduate students through presentations of their research results in the Seminars pursue a better formation of students on dissemination research activities and maximize their critical thinking.

In these Seminars the participate several speakers related with the groups of NEIKER and UPV/EHU participating in the PhytoSudoe project: (i) senior researchers of the Phytosudoe Project Dr. Michel Mench (INRA/University of Bordeaux) and Dr. Carlos Garbisu (NEIKER); (ii) postgraduate researchers: Anders Lanzén (NEIKER) and María T. Gómez-Sagasti (UPV/EHU) and (iii) the doctorate student Rafael Gómez supervised by José M. Becerril (UPV/EHU) and Carlos Garbisu. Title of the talks and other information about the speakers and the organization can be consulted in the booklet for dissemination of the Seminars.